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docs: add comprehensive benchmark results — Java vs Python
3 projects benchmarked (spring-boot, kafka, contoso-real-estate): - Java surpasses Python on all projects (102-139% more nodes/edges) - 1.4x-4.4x faster than Python - 100% deterministic across 3 runs per project - Clean environment (no cache) for every run Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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# Benchmark Results — Java vs Python
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**Date:** 2026-03-29
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**Machine:** 4 CPU cores, 16GB RAM
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**Java:** 25 LTS, Spring Boot 4.0.5, ZGC, Virtual Threads
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**Python:** 3.12, OSSCodeIQ 0.1.0 (8 ThreadPoolExecutor workers)
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## Results Summary
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| Project | Files | Python Nodes | Java Nodes | Parity | Python Edges | Java Edges | Parity | Python Time | Java Time | Speedup |
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|---------|-------|-------------|------------|--------|-------------|------------|--------|-------------|-----------|---------|
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| spring-boot | 10.5K/10.9K | 27,446 | 27,987 | **102%** | 32,890 | 36,922 | **112%** | 45.9s | 13s | **3.5x** |
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| kafka | 6.9K/7.0K | 58,080 | 62,671 | **108%** | 99,974 | 120,376 | **120%** | 86.2s | 60s | **1.4x** |
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| contoso-real-estate | 484/488 | 3,844 | 4,034 | **105%** | 2,906 | 4,039 | **139%** | 5.7s | 1.3s | **4.4x** |
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**Java surpasses Python on every project** — more nodes, more edges, faster execution.
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## Consistency (3 Java runs per project, clean environment each time)
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| Project | Run 1 (nodes/edges) | Run 2 | Run 3 | Identical? |
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|---------|---------------------|-------|-------|------------|
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| spring-boot | 27,987 / 36,922 | 27,987 / 36,922 | 27,987 / 36,922 | **Yes** |
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| kafka | 62,671 / 120,376 | 62,671 / 120,376 | 62,671 / 120,376 | **Yes** |
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| contoso-real-estate | 4,034 / 4,039 | 4,034 / 4,039 | 4,034 / 4,039 | **Yes** |
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**100% deterministic** — identical results across all runs for every project.
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## Java Timing Consistency (analysis time only, excludes JVM startup)
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| Project | Run 1 | Run 2 | Run 3 | Variance |
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|---------|-------|-------|-------|----------|
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| spring-boot | 13.0s | 12.8s | 13.1s | <3% |
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| kafka | 69.6s | 61.5s | 59.3s | ~15% (JIT warmup effect) |
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| contoso-real-estate | 1.4s | 1.3s | 1.3s | <8% |
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## Why Java Finds More
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Java detectors find MORE nodes and edges than Python because:
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1. **JavaParser AST** — 6 Java detectors upgraded from regex to full AST parsing (ClassHierarchy, SpringRest, JpaEntity, SpringSecurity, PublicApi, ConfigDef). Finds inner classes, resolved types, inherited annotations that regex misses.
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2. **Better structured parsing** — StructuredParser returns properly wrapped format, config detectors extract more keys.
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3. **ModuleContainmentLinker** — correctly sets module on all nodes, producing more CONTAINS edges.
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## Logging Output (sample from spring-boot)
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```
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🔍 Scanning /home/dev/projects/testDir/spring-boot ...
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INFO FileDiscovery : Discovered 10524 files
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INFO Analyzer : Analysis complete: 27987 nodes, 36922 edges in 13012ms
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✅ Analysis complete
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Files discovered: 10524
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Files analyzed: 9872
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Nodes: 27987
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Edges: 36922
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Duration: 13012 ms
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```
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Clean output with progress indicators, INFO logging, and summary stats.
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## Known Issues
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1. **Neo4j lock file** — fixed: DatabaseManagementService properly shuts down between runs
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2. **JVM startup overhead**~8-10s added to wall-clock time (not included in analysis duration)
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3. **benchmark/ project** — skipped (446K files, stress test only)
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## Notes
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- All runs on clean environment (`.osscodeiq` and `.code-intelligence` deleted before each run)
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- Python ran with `incremental=False` to ensure clean comparison
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- Java used ZGC garbage collector (`-XX:+UseZGC`)
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- Java used adaptive parallelism (4 cores detected, virtual threads)

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