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@neuronsimulator The NEURON Simulator

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    96 repositories

    • nrn

      Public
      NEURON Simulator
      simulationneurosciencehigh-performance-computing
      simulationneurosciencehigh-performance-computingneuron
      C++
      •
      Other
      •141•515•334•103•Updated Apr 29, 2026Apr 29, 2026

    • rxdtestdata

      Public
      Data used to test the NEURON rxd module
      BSD 3-Clause "New" or "Revised" License
      •1•1•0•0•Updated Jan 6, 2026Jan 6, 2026

    • nrn-modeldb-ci

      Public
      NEURON ModelDB CI tools
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •4•4•32•12•Updated Dec 10, 2025Dec 10, 2025

    • nrn-build-ci

      Public
      Repository for scheduled NEURON CI.
      Shell
      •4•0•5•3•Updated Dec 10, 2025Dec 10, 2025

    • 2019883

      Public
      Biophysical model of L5 Pyramidal Neuron (Headley, Latimer et al., 2025)
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • 2018014

      Public
      Model of dentate granule cell hyperexcitability in bipolar disorder, and the effects of lithium (Singh et al., 2025)
      Jupyter Notebook
      •1•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • 2019896

      Public
      Inner retina; pathological retina spontaneous oscillation (Horie et al, 2025)
      NMODL
      •1•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • coding-conventions

      Public
      Fork of https://github.com/BlueBrain/hpc-coding-conventions
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 23, 2025Oct 23, 2025

    • PyNN

      Public
      A Python package for simulator-independent specification of neuronal network models.
      Python
      •
      Other
      •135•0•0•0•Updated Oct 16, 2025Oct 16, 2025

    • netpyne

      Public
      A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.
      Python
      •
      MIT License
      •140•0•0•0•Updated Oct 16, 2025Oct 16, 2025

    • 144526

      Public
      State and location dependence of action potential metabolic cost (Hallermann et al., 2012)
      AMPL
      •2•0•0•0•Updated Oct 1, 2025Oct 1, 2025

    • 118662

      Public
      Drosophila projection neuron electrotonic structure (Gouwens and Wilson 2009)
      AMPL
      •2•0•0•0•Updated Oct 1, 2025Oct 1, 2025

    • 3807

      Public
      Leech Mechanosensory Neurons: Synaptic Facilitation by Reflected APs (Baccus 1998)
      AMPL
      •2•0•0•0•Updated Oct 1, 2025Oct 1, 2025

    • 244922

      Public
      Conductance based model for short term plasticity at CA3-CA1 synapses (Mukunda & Narayanan 2017)
      AMPL
      •2•0•0•0•Updated Sep 29, 2025Sep 29, 2025

    • 2018017

      Public
      Depolarization baseline offset in CA1 pyramidal neurons (Kumar et al., 2025)
      AGS Script
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 266578

      Public
      Molecular layer interneurons in cerebellum encode valence in associative learning (Ma et al 2020)
      AMPL
      •3•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 267599

      Public
      Cholinergic Modulation Shifts the Response of CA1 Pyramidal Cells to Depolarizing Ramps via TRPM4 Channels with Potential Implications for Place Cell Firing (Co…
      PostScript
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 267140

      Public
      Long-Term Inactivation of Na+ Channels as a Mech of Adaptation in CA1 Pyr Cells (Upchurch et al 2022)
      PostScript
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 258643

      Public
      Control of oscillations and spontaneous firing in dopamine neurons (Rumbell & Kozloski 2019)
      Python
      •4•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 180789

      Public
      Alcohol action in a detailed Purkinje neuron model and an efficient simplified model (Forrest 2015)
      GLSL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 150551

      Public
      Calcium waves and mGluR-dependent synaptic plasticity in CA1 pyr. neurons (Ashhad & Narayanan 2013)
      AMPL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 125689

      Public
      Balance of excitation and inhibition (Carvalho and Buonomano 2009)
      MATLAB
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 123453

      Public
      Effect of voltage sensitive fluorescent proteins on neuronal excitability (Akemann et al. 2009)
      AMPL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 122329

      Public
      Model of SK current's influence on precision in Globus Pallidus Neurons (Deister et al. 2009)
      AMPL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 105385

      Public
      Nav1.6 sodium channel model in globus pallidus neurons (Mercer et al. 2007)
      AMPL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 98005

      Public
      D2 dopamine receptor modulation of interneuronal activity (Maurice et al. 2004)
      AMPL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 97860

      Public
      Rejuvenation model of dopamine neuron (Chan et al. 2007)
      AMPL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 84589

      Public
      Extracellular Action Potential Simulations (Gold et al 2007)
      MATLAB
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 48332

      Public
      Cerebellar Purkinje Cell: resurgent Na current and high frequency firing (Khaliq et al 2003)
      AMPL
      •2•0•0•0•Updated Sep 24, 2025Sep 24, 2025

    • 2017402

      Public
      Substantia Nigra Par Compacta (Ortner et al., 2017)
      NMODL
      •2•0•0•0•Updated Sep 23, 2025Sep 23, 2025
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